| 850290 | 850438 | 850290; YCL069W; VBA3 | 850438; YCR075C; ERS1 | physical; direct | PCA | direct interaction | — | 4932 | 4932 | 16093310 | BioGRID | 5 |
| 850290 | 855113 | 850290; YCL069W; VBA3 | 855113; YMR088C; VBA1 | genetic; direct | Phenotypic Enhancement | additive genetic interaction defined by inequality | — | 4932 | 4932 | 15572352 | BioGRID | 5 |
| 850290 | 854253 | 850290; YCL069W; VBA3 | 854253; YOR086C; TCB1 | genetic; direct | Negative Genetic | additive genetic interaction defined by inequality | — | 4932 | 4932 | 20093466 | BioGRID | 5 |
| 850290 | 854033 | 850290; YCL069W; VBA3 | 854033; YOL116W; MSN1; FUP1; HRB382; MSS10; PHD2 | genetic; direct | Negative Genetic | additive genetic interaction defined by inequality | — | 4932 | 4932 | 20093466 | BioGRID | 5 |
| 850290 | 851762 | 850290; YCL069W; VBA3; 851762; YDR181C; SAS4 | 851762; YDR181C; SAS4; 850290; YCL069W; VBA3 | genetic; direct | Negative Genetic | additive genetic interaction defined by inequality | — | 4932 | 4932 | 20093466 | BioGRID | 5 |
| 850290 | 852596 | 850290; YCL069W; VBA3 | 852596; YBR293W; VBA2 | genetic; direct | Phenotypic Enhancement | additive genetic interaction defined by inequality | — | 4932 | 4932 | 15572352 | BioGRID | 5 |
| 850290 | 854372 | 850290; YCL069W; VBA3 | 854372; YOR197W; MCA1; YCA1 | genetic; direct | Negative Genetic | additive genetic interaction defined by inequality | — | 4932 | 4932 | 20093466 | BioGRID | 5 |
| 850290 | 851643 | 850290; YCL069W; VBA3 | 851643; YDR071C; PAA1 | genetic; direct | Negative Genetic | additive genetic interaction defined by inequality | — | 4932 | 4932 | 20093466 | BioGRID | 5 |
| 850290 | 854813 | 850290; YCL069W; VBA3 | 854813; YIL004C; BET1; SLY12 | physical; direct | PCA | direct interaction | — | 4932 | 4932 | 16093310 | BioGRID | 5 |
| 850292 | 851173 | 850292; YCL067C; HMLALPHA2; ALPHA2 | 851173; YLR452C; SST2 | genetic; direct | Synthetic Lethality | synthetic genetic interaction defined by inequality | — | 4932 | 4932 | 13680367 | BioGRID | 5 |
| 850292 | 852410 | 850292; YCL067C; HMLALPHA2; ALPHA2 | 852410; YBR112C; CYC8; CRT8; SSN6 | physical; direct | Reconstituted Complex | association | — | 4932 | 4932 | 10759558 | BioGRID | 5 |
| 850292 | 850459 | 850292; YCL067C; HMLALPHA2; ALPHA2 | 850459; YCR097W; HMRA1; YCR097WB | physical; direct | Co-crystal Structure | association | — | 4932 | 4932 | 7569974 | BioGRID | 5 |
| 850292 | 850445 | 850292; YCL067C; HMLALPHA2; ALPHA2 | 850445; YCR084C; TUP1; CRT4; UMR7; FLK1; ROX4; AER2; CYC9; AAR1; AMM1; SFL2 | physical; direct | Reconstituted Complex | direct interaction | — | 4932 | 4932 | 9315661 | BioGRID | 5 |
| 850292 | 853269 | 850292; YCL067C; HMLALPHA2; ALPHA2 | 853269; YJL170C; ASG7 | genetic; direct | Synthetic Lethality | additive genetic interaction defined by inequality | — | 4932 | 4932 | 13680367 | BioGRID | 5 |
| 850293 | 856484 | 850293; YCL066W; HMLALPHA1; ALPHA1 | 856484; YHR084W; STE12 | physical; direct | Two-hybrid | direct interaction | — | 4932 | 4932 | 18719252 | BioGRID | 5 |
| 850293 | 856058 | 850293; YCL066W; HMLALPHA1; ALPHA1 | 856058; YPL049C; DIG1; RST1 | physical; direct | Two-hybrid | direct interaction | — | 4932 | 4932 | 18719252 | BioGRID | 5 |
| 850293 | 852091 | 850293; YCL066W; HMLALPHA1; ALPHA1 | 852091; YDR480W; DIG2; RST2 | physical; direct | Two-hybrid | direct interaction | — | 4932 | 4932 | 18719252 | BioGRID | 5 |
| 850293 | 850292 | 850293; YCL066W; HMLALPHA1; ALPHA1 | 850292; YCL067C; HMLALPHA2; ALPHA2 | physical; direct | Co-crystal Structure | direct interaction | — | 4932 | 4932 | 7569974 | BioGRID | 5 |
| 850295 | 856589 | 850295; YCL064C; CHA1 | 856589; YHR183W; GND1 | genetic; direct | Negative Genetic | additive genetic interaction defined by inequality | — | 4932 | 4932 | 21623372 | BioGRID | 5 |
| 850295 | 851086 | 850295; YCL064C; CHA1 | 851086; YLR371W; ROM2 | genetic; direct | Negative Genetic | suppressive genetic interaction defined by inequality | — | 4932 | 4932 | 20093466 | BioGRID | 5 |
| 850295 | 852989 | 850295; YCL064C; CHA1 | 852989; YGR097W; ASK10; RGC2 | genetic; direct | Positive Genetic | additive genetic interaction defined by inequality | — | 4932 | 4932 | 20093466 | BioGRID | 5 |
| 850295 | 850420 | 850295; YCL064C; CHA1 | 850420; YCR053W; THR4 | genetic; direct | Negative Genetic | additive genetic interaction defined by inequality | — | 4932 | 4932 | 20093466 | BioGRID | 5 |
| 850295 | 855607 | 850295; YCL064C; CHA1 | 855607; YNL116W; DMA2; CHF2 | genetic; direct | Negative Genetic | additive genetic interaction defined by inequality | — | 4932 | 4932 | 20093466 | BioGRID | 5 |
| 850295 | 855642 | 850295; YCL064C; CHA1 | 855642; YNL082W; PMS1 | genetic; direct | Negative Genetic | additive genetic interaction defined by inequality | — | 4932 | 4932 | 20093466 | BioGRID | 5 |
| 850295 | 851071 | 850295; YCL064C; CHA1 | 851071; YLR357W; RSC2 | genetic; direct | Positive Genetic | additive genetic interaction defined by inequality | — | 4932 | 4932 | 20093466 | BioGRID | 5 |
