Representation

Denigma

www.denigma.de

Daniel Wuttke | Crowed-sourcing support | Data Unification, Integration, Analysis & Exchange

Enigma

• WW2: Encoding/Decoding information

• Each submarine equipped with an Enigma

• Enabled exchange of information

Biological Information

• Post-genomic era

data increases rapidly

• but not fast enough

• computational and organizational challenges

• Genomic code

everything is encoded in the genome

• also Aging

Can it be decoded?

Decoding Ageing

• Objective: Construction of a Digital Decipher Machine

• Rationality: Research + Programming + Design

• Implementation: Open Source & Document-Driven Development

• Philosophy: Everything editable, modifiable & programmable

• Modularity: Built by apps and Data Units

New Concepts

"Denigma is as strong as diamond, and as flexible as carbon fibre, but in its very heart its all in silicon"

Unity

A schema that fits everything -> Data Unit

reStructuredText

Data Entries supports:

Tags

Categories

Hierarchy

Relations

Graphs

Next-gen Ontology Construction

Denigma learns from what you teach it

Unify

• Multiple databases - multi-strategy endeavour

• Information integration (DBs, Literature, Experts)

• Robust data unification protocol

• Integrator sector:

Annotations | Interactions | Expressions | Datasets | Lifespan

• Deciphering algorithms on unified data

• Logical reasoning/inference

Linking Researchers

• Communication platform for effective collaborations

• Data Units for rapid exchange of information

• Open Distributed Science

Building A Denigma

Contact: Hevok at Denigma