| 98376 | 78891 | 98376; Gorab; NTKL-BP1; Scyl1bp1; AI467484; 78891; Scyl1; p105; mdf; 2810011O19Rik; C85140; Ntkl; mfd | 78891; Scyl1; p105; mdf; 2810011O19Rik; C85140; Ntkl; mfd; 98376; Gorab; NTKL-BP1; Scyl1bp1; AI467484 | physical; direct | Affinity Capture-Western; Two-hybrid | physical association; direct interaction | — | 10090 | 10090 | 12783284 | BioGRID | 6 |
| 21888 | 17701 | 21888; Tle4; X83332; Bce-1; Grg4; Bce1; X83333; ESTM14; 5730411M05Rik; AA792082; ESTM13; 17701; Msx1; AI324650; AA675338; Hox-7; Hox7.1; Hox7; msh | 17701; Msx1; AI324650; AA675338; Hox-7; Hox7.1; Hox7; msh; 21888; Tle4; X83332; Bce-1; Grg4; Bce1; X83333; ESTM14; 5730411M05Rik; AA792082; ESTM13 | physical; direct | Affinity Capture-Western | physical association | — | 10090 | 10090 | 16002402 | BioGRID | 5 |
| 21888 | 18505 | 21888; Tle4; X83332; Bce-1; Grg4; Bce1; X83333; ESTM14; 5730411M05Rik; AA792082; ESTM13; 18505; Pax3; Sp; Pax-3; splotch | 18505; Pax3; Sp; Pax-3; splotch; 21888; Tle4; X83332; Bce-1; Grg4; Bce1; X83333; ESTM14; 5730411M05Rik; AA792082; ESTM13 | physical; direct | Affinity Capture-Western | suppressive genetic interaction defined by inequality; physical association | — | 10090 | 10090 | 15729346 | BioGRID | 6 |
| 21888 | 18986 | 21888; Tle4; X83332; Bce-1; Grg4; Bce1; X83333; ESTM14; 5730411M05Rik; AA792082; ESTM13; 18986; Pou2f1; Otf-1; Oct-1; NF-A1; 2810482H01Rik; Otf1; Oct1 | 18986; Pou2f1; Otf-1; Oct-1; NF-A1; 2810482H01Rik; Otf1; Oct1; 21888; Tle4; X83332; Bce-1; Grg4; Bce1; X83333; ESTM14; 5730411M05Rik; AA792082; ESTM13 | physical; direct | Affinity Capture-Western | physical association | — | 10090 | 10090 | 16002402 | BioGRID | 5 |
| 21888 | 14797 | 21888; Tle4; X83332; Bce-1; Grg4; Bce1; X83333; ESTM14; 5730411M05Rik; AA792082; ESTM13; 14797; Aes; Grg5; Grg; AL024115 | 14797; Aes; Grg5; Grg; AL024115; 21888; Tle4; X83332; Bce-1; Grg4; Bce1; X83333; ESTM14; 5730411M05Rik; AA792082; ESTM13 | physical; direct | Affinity Capture-Western | physical association | — | 10090 | 10090 | 16002402 | BioGRID | 5 |
| 21888 | 20473 | 21888; Tle4; X83332; Bce-1; Grg4; Bce1; X83333; ESTM14; 5730411M05Rik; AA792082; ESTM13 | 20473; Six3; Six3b; Six3alpha; Six3beta; E130112M24Rik; Six3a | physical; direct | Affinity Capture-Western; Reconstituted Complex | direct interaction; physical association | — | 10090 | 10090 | 12050133 | BioGRID | 6 |
| 21888 | 20476 | 21888; Tle4; X83332; Bce-1; Grg4; Bce1; X83333; ESTM14; 5730411M05Rik; AA792082; ESTM13 | 20476; Six6; Optx2; Six9 | physical; direct | Reconstituted Complex | direct interaction | — | 10090 | 10090 | 12050133 | BioGRID | 5 |
| 72049 | 22034 | 72049; Tnfrsf13c; 2010006P15Rik; Bcmd; Lvis22; Baffr; Bcmd-1; BAFF-R; Bcmd1 | 22034; RP23-313G3.1; Traf6; C630032O20Rik; 2310003F17Rik; AI851288 | physical; direct | Affinity Capture-Western | physical association | — | 10090 | 10090 | 21041452 | BioGRID | 5 |
| 72049 | 22030 | 72049; Tnfrsf13c; 2010006P15Rik; Bcmd; Lvis22; Baffr; Bcmd-1; BAFF-R; Bcmd1 | 22030; RP23-464C2.1; Traf2; AI325259 | physical; direct | Affinity Capture-Western | physical association | — | 10090 | 10090 | 21041452 | BioGRID | 5 |
| 72049 | 22031 | 72049; Tnfrsf13c; 2010006P15Rik; Bcmd; Lvis22; Baffr; Bcmd-1; BAFF-R; Bcmd1 | 22031; Traf3; LAP1; AI528849; CAP-1; amn; CD40bp; CRAF1; T-BAM | physical; direct | Affinity Capture-Western | physical association | — | 10090 | 10090 | 21041452 | BioGRID | 5 |
| 66603 | 13017 | 66603; Sip1; 1700012N19Rik; Gemin2 | 13017; Ctbp2; D7Ertd45e; Ribeye; AA407280; Gtrgeo6 | physical; direct | Two-hybrid | direct interaction | — | 10090 | 10090 | 12714599 | BioGRID | 5 |
| 66603 | 17129 | 66603; Sip1; 1700012N19Rik; Gemin2 | 17129; Smad5; MusMLP; Madh5; AI451355; 1110051M15Rik; Dwf-C | physical; direct | Two-hybrid | direct interaction | — | 10090 | 10090 | 12714599 | BioGRID | 5 |
| 66671 | 12572 | 66671; Ccnh; AW538719; AV102684; 6330408H09Rik; AI661354; 12572; Cdk7; AI528512; Cdkn7; C230069N13; Crk4; AI323415 | 12572; Cdk7; AI528512; Cdkn7; C230069N13; Crk4; AI323415; 66671; Ccnh; AW538719; AV102684; 6330408H09Rik; AI661354 | physical; direct | Affinity Capture-Western | physical association; direct interaction | — | 10090 | 10090 | 11319144 | BioGRID | 6 |
| 66724 | 56208 | 66724; RP23-181A7.1; Tab3; Map3k7ip3; 4921526G09Rik; mKIAA4135 | 56208; RP23-281C18.12-004; Becn1; 5430417M23Rik; Atg6; 4921513J16Rik | physical; direct | Two-hybrid | direct interaction | — | 10090 | 10090 | 21976705 | BioGRID | 5 |
| 66724 | 22190 | 66724; RP23-181A7.1; Tab3; Map3k7ip3; 4921526G09Rik; mKIAA4135 | 22190; Ubc; Rps27a; Ubb; 2700054O04Rik; TI-225; Uba52; AI194771 | physical; direct | Reconstituted Complex | direct interaction | — | 10090 | 10090 | 19136968 | BioGRID | 5 |
| 230654 | 56438 | 230654; RP23-383D12.7; Lrrc41; AW555107; D630045E04Rik; D730026A16Rik; AA409966; MUF1 | 56438; Rbx1; AA517855; ROC1; 1500002P15Rik | physical; direct | Reconstituted Complex | association | — | 10090 | 10090 | 11384984 | BioGRID | 5 |
| 66894 | 14836 | 66894; Wwp2; AW554328; AA690238; AIP2; 1300010O06Rik; 14836; Gsc | 14836; Gsc; 66894; Wwp2; AW554328; AA690238; AIP2; 1300010O06Rik | physical; direct | Biochemical Activity; Reconstituted Complex; Affinity Capture-Western | direct interaction; physical association | Ubiquitination | 10090 | 10090 | 21170031 | BioGRID | 7 |
| 66894 | 13654 | 66894; Wwp2; AW554328; AA690238; AIP2; 1300010O06Rik | 13654; Egr2; Zfp-6; Krox-20; Zfp-25; Krox20; NGF1-B; Egr-2 | physical; direct | Affinity Capture-Western | physical association | — | 10090 | 10090 | 19651900 | BioGRID | 5 |
| 66894 | 18999 | 66894; Wwp2; AW554328; AA690238; AIP2; 1300010O06Rik | 18999; Pou5f1; Otf-3; Oct3; Oct-3/4; Otf3; Oct3/4; Oct-3; Oct4; Otf-4; Oct-4; Otf3-rs7; Otf4; NF-A3; Otf3g | physical; direct | Reconstituted Complex | suppressive genetic interaction defined by inequality | — | 10090 | 10090 | 15047715 | BioGRID | 5 |
| 230904 | 21402 | 230904; RP23-139J21.11-001; Fbxo2; Fbs2; FBG1; FBX2; Fbs1; Prpl4; NFB42 | 21402; RP23-223A11.5; Skp1a; p19Skp1; 2610206H23Rik; EMC19; p19A; Tceb1l; SKP1; 2610043E24Rik; OCP-II; OCP2; 15kDa | physical; direct | Affinity Capture-Western; Co-fractionation | colocalization; physical association | — | 10090 | 10090 | 17494702; 17215248 | BioGRID | 7 |
| 230904 | 269523 | 230904; RP23-139J21.11-001; Fbxo2; Fbs2; FBG1; FBX2; Fbs1; Prpl4; NFB42 | 269523; RP23-124L1.5; Vcp; 3110001E05; CDC48; p97; p97/VCP | physical; direct | Affinity Capture-Western | suppressive genetic interaction defined by inequality | — | 10090 | 10090 | 15723043 | BioGRID | 5 |
| 230904 | 26965 | 230904; RP23-139J21.11-001; Fbxo2; Fbs2; FBG1; FBX2; Fbs1; Prpl4; NFB42 | 26965; Cul1 | physical; direct | Affinity Capture-Western | direct interaction | — | 10090 | 10090 | 17215248 | BioGRID | 5 |
| 19651 | 14056 | 19651; Rbl2; Rb2; p130; 14056; Ezh2; Enx1h; KMT6; Enx-1; mKIAA4065 | 14056; Ezh2; Enx1h; KMT6; Enx-1; mKIAA4065; 19651; Rbl2; Rb2; p130 | physical; direct | Affinity Capture-Western | direct interaction; physical association | — | 10090 | 10090 | 15077161 | BioGRID | 6 |
| 19651 | 433759 | 19651; Rbl2; Rb2; p130 | 433759; RP23-209C6.7; Hdac1; HD1; Hdac1-ps; RPD3; MommeD5 | physical; direct | Reconstituted Complex; Affinity Capture-Western | physical association; direct interaction | — | 10090 | 10090 | 9823308 | BioGRID | 6 |
| 67203 | 18472 | 67203; Nde1; mNudE; 2810027M15Rik; AU042936; Nude; AW822251 | 18472; RP23-194P5.2; Pafah1b1; MMS10-U; Pafaha; Mdsh; LIS-1; Ms10u; Lis1 | physical; direct | Reconstituted Complex | direct interaction | — | 10090 | 10090 | 11163258 | BioGRID | 5 |
