Created on Dec. 6, 2012, 11:56 p.m. by Hevok & updated on Jan. 12, 2013, 5:35 p.m. by Hevok
Denigma |d|
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| www.denigma.de
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| `Daniel Wuttke`_ | Crowed-sourcing support | Data Unification, Integration, Analysis & Exchange
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.. Daniel Wuttke: http://denigma.de/experts/profile/Daniel_Wuttke
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Enigma |d|
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* WW2: Encoding/Decoding information
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* Each submarine equipped with an Enigma
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* Enabled exchange of information
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Biological Information |d|
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==========================
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* Post-genomic era
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+ data increases rapidly
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+ but not fast enough
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+ computational and organizational challenges
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* Genomic code
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+ everything is encoded in the genome
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+ also Aging
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**Can it be decoded?**
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Decoding Ageing |d|
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* Objective: Construction of a `**dDigital dDecipher mMachine**` |e| |s|
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* Rationality: Research + Programming + Design
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* Implementation: Open-s Source & Documentation-Driven Development
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* Philosophy: Everything is **editable**, modifiable & programmable
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* Modularity: Built by apps and dData uUnits
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.. |e| image:: http://dgallery.s3.amazonaws.com/enigma.jpg
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.. |s| image:: http://dgallery.s3.amazonaws.com/red_sphere.jpg
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.. www.denigma.de: http://www.denigma.de
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¶**New Concepts**_ |m|
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.. |m| image:: http://dgallery.s3.amazonaws.com/modularity.jpg
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.. _concepts: http://denigma.de/data/entry/denigma-concepts
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| "Denigma is as
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| strong as diamond, and |diamond|
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| as flexible as carbon fibre, but |carbon|
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| in its very heart its all in silicon" |silicon|
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.. |diamond| image:: http://dgallery.s3.amazonaws.com/diamond.jpeg
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.. |carbon| image:: http://dgallery.s3.amazonaws.com/carbon-fiber.jpg
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.. |silicon| image:: http://dgallery.s3.amazonaws.com/silicon.jpg
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Unity |d|
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=========
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* A schema that fits everything -> Data Unit
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* reStructuredText |u|
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* **Data eEntryies** supports: |u|
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* ===== =========== ==========
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Tags_ Categories_ Hierarchy_
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===== =========== ==========
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|t| |c| |h|
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===== =========== ==========
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.. _tags: http://denigma.de/data/entry/data-tags
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.. _categories: http://denigma.de/data/entry/data-categories
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.. _hierarchy: http://denigma.de/data/entry/data-hierarchy
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* ========= ==================
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Relations Graphs &_ Networks
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========= ==================
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|r| |g|
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========= ==================
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* Next-gen oOntology cConstruction
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* Denigma learns from what you teach it
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.. _Graphs: http://denigma.de/data/entry/graph
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.. |u| image:: http://dgallery.s3.amazonaws.com/data_unit.jpg
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.. |t| image:: http://dgallery.s3.amazonaws.com/tags.png
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.. |c| image:: http://dgallery.s3.amazonaws.com/categories.jpg
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.. |h| image:: http://dgallery.s3.amazonaws.com/hierarchy.jpg
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.. |r| image:: http://dgallery.s3.amazonaws.com/relations.jpg
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.. |g| image:: http://dgallery.s3.amazonaws.com/graph.png
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Unify |d|
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* Multiple databases - multi-strategy endeavour
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* Information integration (DBs, lLiterature, eExperts)
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* Robust data unification protocol |intersection|
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* Integrator sector: |integrator|
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+ Annotations | Interactions | Expressions | Datasets | Lifespan
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* Deciphering algorithms on unified data
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* Logical reasoning/inference
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Linking Researchers
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===================
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* Communication platform for effective collaborations
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* Data Units for rapid exchange of information
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* Open Distributed Science
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.. image:: http://dgallery.s3.amazonaws.com/ConnDots_Header.jpg
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Building A Denigma |d|
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======================
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Contact: Hevok`_ at Denigma |sphere|
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.. |intersection| image:: http://dgallery.s3.amazonaws.com/logic-and-reasoning-skills.jpg
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.. |integrator| image:: http://dgallery.s3.amazonaws.com/integration.jpg
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.. |d| image:: http://dgallery.s3.amazonaws.com/favi.png
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.. _`hevok: http://www.denigma.de/profiles/profile/hevok/
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